STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBTFNucleolar transcription factor 1 isoform a. (764 aa)    
Predicted Functional Partners:
POLR1E
DNA-directed RNA polymerase I subunit RPA49.
    
 0.720
TAF1
Transcription initiation factor TFIID subunit.
   
 0.716
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.684
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.650
GTF2H1
General transcription factor IIH subunit 1.
    
 0.647
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.643
GTF2H3
General transcription factor IIH subunit 3 isoform a.
    
 0.639
TAF1A
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform 1.
   
 0.630
GTF2H2
General transcription factor IIH subunit.
    
 0.622
TBP
TATA-box binding protein.
   
 0.616
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.