STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A13Solute carrier family 22 member 13. (551 aa)    
Predicted Functional Partners:
SPCS3
Signal peptidase complex subunit 3.
    
   0.725
XYLB
Xylulokinase.
   
  
 0.663
SLC16A5
Solute carrier family 16 member 5.
   
 
 0.641
SLC2A9
Solute carrier family 2 member 9; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
 
 0.612
SLC22A18
Solute carrier family 22 member 18.
   
 
 0.600
SLC16A6
Solute carrier family 16 member 6.
   
 
 0.594
SLC16A14
Solute carrier family 16 member 14.
    
 
 0.591
PDZK1
Uncharacterized protein.
   
 
 0.584
OXSR1
Oxidative stress responsive kinase 1.
      
 0.573
SLC34A1
Solute carrier family 34 member 1.
   
 0.569
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.