STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM147Transmembrane protein 147 isoform 1. (224 aa)    
Predicted Functional Partners:
NCLN
Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.
    
 
 0.911
CCDC47
Coiled-coil domain-containing protein 47.
    
 
 0.910
TMCO1
Transmembrane and coiled-coil domains 1.
   
 
 0.880
LIN52
Lin-52 DREAM MuvB core complex component.
   
 0.840
LIN9
Protein lin-9 homolog isoform 1.
    
 0.831
SEC61A1
Protein transport protein Sec61 subunit alpha isoform 1.
   
 
 0.763
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.763
SEC61G
Uncharacterized protein.
   
   0.748
RPL18
Ribosomal protein L18.
    
   0.740
RPL35
Ribosomal protein L35.
    
   0.740
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.