STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D10ATBC1 domain family member 10A. (516 aa)    
Predicted Functional Partners:
RAB35
Ras-related protein Rab-35 isoform 1.
   
 0.853
SYTL1
Synaptotagmin like 1.
     
 0.699
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.692
SLC9A3R1
Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.
    
 
 0.663
IFT27
Intraflagellar transport 27.
   
 0.615
TBC1D22B
TBC1 domain family member 22B.
      
 0.589
TBC1D21
TBC1 domain family member 21.
   
  
 0.576
RAB27A
RAB27A, member RAS oncogene family.
      
 0.551
SYTL2
Uncharacterized protein.
     
 0.545
TBC1D19
TBC1 domain family member 19.
      
 0.541
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.