STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFRP1ADP-ribosylation factor-related protein 1 isoform a. (201 aa)    
Predicted Functional Partners:
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.872
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.835
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.811
UNC50
Unc-50 inner nuclear membrane RNA binding protein.
    
 
 0.802
VPS54
Vacuolar protein sorting-associated protein 54 isoform 1.
     
 0.800
VPS53
Vacuolar protein sorting-associated protein 53 homolog isoform 1.
     
 0.794
SYS1
Uncharacterized protein.
   
 
 0.776
ENSCJAP00000075082
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
   
 
 0.776
VPS52
Vacuolar protein sorting-associated protein 52 homolog.
   
 0.760
ARL3
ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.
   
0.744
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.