STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLF1Ankyrin repeat domain-containing protein 32. (1059 aa)    
Predicted Functional Partners:
CDC45
Cell division cycle 45.
   
 
 0.993
BARD1
BRCA1 associated RING domain 1.
   
0.989
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.988
WRN
WRN RecQ like helicase.
   
 0.978
ATM
Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...]
   
 0.972
RAD1
RAD1 checkpoint DNA exonuclease.
    
 0.965
RAD17
Cell cycle checkpoint protein RAD17 isoform 2.
   
 0.964
RHNO1
RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 isoform 1.
  
 
 0.963
DNA2
DNA replication helicase/nuclease 2.
   
 0.959
ATRIP
ATR-interacting protein isoform 1.
    
 0.958
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (30%) [HD]