STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZGPATZinc finger CCCH-type with G patch domain-containing protein isoform c. (501 aa)    
Predicted Functional Partners:
PHF13
PHD finger protein 13.
   
  
 0.787
ZNF512B
Zinc finger protein 512B.
      
 0.779
BBX
BBX high mobility group box domain containing.
      
 0.778
SLC25A20
Mitochondrial carnitine/acylcarnitine carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
    
 0.748
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3.
   
   0.698
MCM10
Minichromosome maintenance 10 replication initiation factor.
      
 0.652
MARCHF6
Membrane associated ring-CH-type finger 6.
   
  
 0.644
RALY
RNA-binding protein Raly isoform 1.
   
  
 0.624
SMUG1
Single-strand selective monofunctional uracil DNA glycosylase isoform 1.
      
 0.620
EME1
Essential meiotic structure-specific endonuclease 1.
   
  
 0.608
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.