STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6U284_CALJAUncharacterized protein. (1275 aa)    
Predicted Functional Partners:
IFT80
WD_REPEATS_REGION domain-containing protein.
   
 0.610
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.581
CCM2L
CCM2 like scaffold protein.
    
 
 0.577
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
   
 0.562
NME8
NME/NM23 family member 8.
   
 
 0.562
MRPL47
39S ribosomal protein L47, mitochondrial isoform a.
    
   0.553
F6VXU8_CALJA
Uncharacterized protein.
    
   0.553
CCDC65
Coiled-coil domain containing 65.
   
 
 0.539
FGGY
FGGY carbohydrate kinase domain containing.
      
 0.537
OR5C1
Olfactory receptor.
      
 0.521
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.