STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM7Uncharacterized protein. (814 aa)    
Predicted Functional Partners:
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.667
MAMLD1
Mastermind like domain containing 1.
   
 0.662
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform 1.
     
 0.656
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
 0.656
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
     
 0.656
CXXC1
CpG-binding protein isoform 1.
     
 0.645
SPO11
SPO11 initiator of meiotic double stranded breaks.
     
 0.613
PPAN
Brix domain-containing protein.
    
 
 0.554
SH3RF3
SH3 domain containing ring finger 3.
   
 0.532
CAPN15
Calpain 15; Belongs to the peptidase C2 family.
   
 0.527
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.