STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAYNLayilin. (381 aa)    
Predicted Functional Partners:
TLN1
Talin 1.
    
 0.835
TLN2
Talin-2.
    
 0.705
MYADM
Myeloid-associated differentiation marker.
    
 
 0.612
GYPC
Glycophorin C (Gerbich blood group).
      
 0.563
TLNRD1
Mesoderm development candidate 1.
    
 0.561
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
    
 0.547
TIGIT
T cell immunoreceptor with Ig and ITIM domains.
      
 0.497
TNR
Tenascin-R.
    
  0.487
TNN
Tenascin N.
    
  0.487
TNC
Tenascin C.
    
  0.487
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.