STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOHLH1Spermatogenesis and oogenesis specific basic helix-loop-helix 1. (404 aa)    
Predicted Functional Partners:
FIGLA
Folliculogenesis specific bHLH transcription factor.
   
  
 0.813
NOBOX
NOBOX oogenesis homeobox.
      
 0.794
LHX8
LIM homeobox 8.
      
 0.747
NANOS2
Nanos C2HC-type zinc finger 2; Belongs to the nanos family.
      
 0.720
ZBTB16
Zinc finger and BTB domain-containing protein 16.
      
 0.702
STRA8
Stimulated by retinoic acid 8.
      
 0.698
SALL4
Uncharacterized protein.
      
 0.627
BCL6B
B-cell CLL/lymphoma 6 member B protein.
      
 0.595
NANOS3
Nanos C2HC-type zinc finger 3; Belongs to the nanos family.
      
 0.584
ADGRA3
Adhesion G protein-coupled receptor A3; Belongs to the G-protein coupled receptor 2 family.
      
 0.580
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.