STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEF8Differentially expressed in FDCP 8 homolog. (505 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance associated.
    
 
 0.631
PRSS36
Polyserase-2; Serine protease. Has a preference for substrates with an Arg instead of a Lys residue in position P1. Belongs to the peptidase S1 family.
      
 0.616
MTHFSD
Methenyltetrahydrofolate synthase domain-containing protein isoform 4.
      
 0.573
TCF25
Transcription factor 25.
 
    
 0.563
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.559
SAMSN1
SAM domain, SH3 domain and nuclear localization signals 1.
   
  
 0.538
TREML2
Ig-like domain-containing protein.
   
  
 0.525
INPP5D
Inositol polyphosphate-5-phosphatase D.
   
  
 0.523
ZNF276
Zinc finger protein 276.
      
 0.519
ENSCJAP00000077025
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
      
 0.503
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.