STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP6SUMO specific peptidase 6. (1112 aa)    
Predicted Functional Partners:
SENP5
SUMO specific peptidase 5.
    
 0.872
SENP2
SUMO specific peptidase 2.
    
0.845
SUMO1
Small ubiquitin-related modifier.
    
 0.831
SENP1
Sentrin-specific protease 1.
    
0.822
SENP3
Sentrin-specific protease 3.
    
0.810
SUMO3
Small ubiquitin-related modifier.
    
 0.804
F7IG57_CALJA
Small ubiquitin-related modifier.
    
 0.804
ENSCJAP00000061564
Small ubiquitin-related modifier.
    
 0.804
SUMO2
Small ubiquitin-related modifier.
    
 0.804
NFATC2IP
Nuclear factor of activated T cells 2 interacting protein.
    
 0.679
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.