STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIK2Salt inducible kinase 2. (1052 aa)    
Predicted Functional Partners:
LOC100408115
Uncharacterized protein; Belongs to the protein kinase superfamily.
  
0.914
PRKACG
Uncharacterized protein; Belongs to the protein kinase superfamily.
  
0.914
PRKACB
cAMP-dependent protein kinase catalytic subunit beta isoform 1; Belongs to the protein kinase superfamily.
   
0.910
PRKACA
cAMP-dependent protein kinase catalytic subunit alpha isoform 1; Belongs to the protein kinase superfamily.
   
0.910
ENSCJAP00000078307
CREB regulated transcription coactivator 2.
    
 
 0.767
CRTC3
CREB-regulated transcription coactivator 3 isoform a.
    
 
 0.581
HDAC4
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 
 0.487
CRTC1
CREB-regulated transcription coactivator 1 isoform 3.
   
 
 0.485
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.465
CPA6
Carboxypeptidase A6.
   
    0.459
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.