STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3HC1Zinc finger C3HC-type containing 1. (502 aa)    
Predicted Functional Partners:
WRN
WRN RecQ like helicase.
      
 0.646
F6WC44_CALJA
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.628
SKP1
S-phase kinase-associated protein 1 isoform b; Belongs to the SKP1 family.
    
 0.628
ENSCJAP00000074230
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.628
ADCY7
Adenylate cyclase type 7; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
      
 0.556
RNF166
Ring finger protein 166.
    
 
 0.548
GPN1
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.542
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.529
ENSCJAP00000073823
Zf-rbx1 domain-containing protein.
    
 0.529
KPTN
Kaptin, actin binding protein.
      
 0.493
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.