STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM187BFamily with sequence similarity 187 member B. (369 aa)    
Predicted Functional Partners:
CBY2
Spermatid associated.
     
 0.694
OR7G3
Olfactory receptor.
   
  
 0.681
CCHCR1
Coiled-coil alpha-helical rod protein 1.
      
 0.678
SLC22A10
Solute carrier family 22 member 10.
      
 0.641
PKD1L2
Uncharacterized protein.
     
 0.618
ANK1
Ankyrin 1.
    
 0.572
ZNF80
Zinc finger protein 80.
     
 0.519
ZNF805
Zinc finger protein 805.
     
 0.519
UNC13A
C2 domain-containing protein.
      
 0.508
SOAT1
O-acyltransferase.
   
  0.507
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.