STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN8Calpain-8; Belongs to the peptidase C2 family. (703 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
0.872
CAST
Calpastatin.
   
 0.817
GPR151
G protein-coupled receptor 151.
      
 0.779
CHRNB3
Neuronal acetylcholine receptor subunit beta-3.
      
 0.727
F7C609_CALJA
Calpain 1; Belongs to the peptidase C2 family.
  
0.645
ENSCJAP00000063975
Uncharacterized protein.
      
 0.645
CCNB3
Cyclin B3; Belongs to the cyclin family.
      
 0.645
DLGAP4
Disks large-associated protein 4 isoform a.
      
 0.644
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
      
 0.644
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.644
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.