STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD62Ankyrin repeat domain 62. (911 aa)    
Predicted Functional Partners:
SMC2
Structural maintenance of chromosomes protein.
    
 0.519
MTMR12
Myotubularin-related protein 12.
    
 
 0.514
SACS
Sacsin molecular chaperone.
   
 
 0.485
ASB15
Ankyrin repeat and SOCS box protein 15.
  
     0.470
VKORC1L1
Vitamin K epoxide reductase complex subunit 1-like protein 1.
      
 0.469
CDKN2D
Cyclin-dependent kinase 4 inhibitor D.
  
     0.453
ASB9
Ankyrin repeat and SOCS box protein 9 isoform 1.
  
     0.449
NFKBIB
NF-kappa-B inhibitor beta isoform 1.
  
 
  0.448
PDZK1
Uncharacterized protein.
    
 0.447
ENSCJAP00000075608
Uncharacterized protein.
    
 0.447
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.