STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSTDystonin. (7437 aa)    
Predicted Functional Partners:
ITGB4
Integrin beta.
   
 0.901
PLEC
Plectin.
     
0.838
COL17A1
Collagen type XVII alpha 1 chain.
   
 0.784
STC2
Stanniocalcin-2.
      
 0.773
MAPRE1
Microtubule associated protein RP/EB family member 1.
    
 
 0.772
ENSCJAP00000060938
Calponin-homology (CH) domain-containing protein.
    
 
 0.772
ENSCJAP00000068607
Calponin-homology (CH) domain-containing protein.
    
 
 0.772
CD151
Tetraspanin.
   
 
 0.758
JUP
Junction plakoglobin.
   
 0.689
DSG3
Desmoglein 3; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.651
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.