STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC180Coiled-coil domain containing 180. (1675 aa)    
Predicted Functional Partners:
ENSCJAP00000072982
Uncharacterized protein.
 
      0.642
TDRD7
Tudor domain-containing protein 7.
 
    
 0.620
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.549
F6WXP5_CALJA
Uncharacterized protein.
 
      0.528
SPAG17
Uncharacterized protein.
  
 
 0.511
BLOC1S5
Biogenesis of lysosome-related organelles complex 1 subunit 5; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO).
      
 0.474
CDK17
Cyclin-dependent kinase 17 isoform 1.
      
 0.468
ENSCJAP00000071371
DUF4550 domain-containing protein.
    
 
 0.405
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.