STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR33Pre-mRNA 3' end processing protein WDR33 isoform 1. (1336 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.999
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.999
FIP1L1
Pre-mRNA 3'-end-processing factor FIP1 isoform 1.
   
 0.999
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.999
SYMPK
Symplekin.
    
 0.998
CPSF4
Cleavage and polyadenylation specificity factor subunit 4 isoform 1.
   
 0.996
WDR82
WD repeat-containing protein 82.
   
 0.994
RBBP6
Uncharacterized protein.
   
 
 0.987
CSTF3
Cleavage stimulation factor subunit 3 isoform 1.
   
 0.982
SSU72
SSU72 homolog, RNA polymerase II CTD phosphatase.
    
 0.967
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.