STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H9KWP5_CALJAIg-like domain-containing protein; Belongs to the MHC class I family. (361 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).
   
 0.762
RPA2
RPA_C domain-containing protein.
   
 0.648
ENSCJAP00000073535
RPA_C domain-containing protein.
   
 0.648
CD8A
CD8a molecule.
   
 0.644
KLRD1
CD94-B.
    
 0.620
TAPBP
TAP binding protein.
   
 0.605
TAP1
Transporter 1, ATP binding cassette subfamily B member.
   
 0.579
PDIA3
Protein disulfide-isomerase.
    
 0.521
CALR
Calreticulin.
    
 0.513
Caja-B3
Ig-like domain-containing protein; Belongs to the MHC class I family.
   
 0.497
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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