STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA2LSpermatogenesis-associated protein 2-like protein. (424 aa)    
Predicted Functional Partners:
RBCK1
RANBP2-type and C3HC4-type zinc finger containing 1.
    
  0.904
SHARPIN
SHANK associated RH domain interactor.
    
  0.904
CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family.
   
 
  0.900
RNF31
E3 ubiquitin-protein ligase RNF31.
     
  0.900
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.772
VPS9D1
VPS9 domain containing 1.
 
   
  0.669
RANBP2
RAN binding protein 2.
    
 0.477
SETD1A
SET domain containing 1A, histone lysine methyltransferase.
  
 0.464
KDM6B
Lysine-specific demethylase 6B.
    
 0.455
KDM6A
Lysine demethylase 6A.
    
 0.455
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.