Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMOD1Tropomodulin 1. (359 aa)    
Predicted Functional Partners:
ADD1
Alpha-adducin isoform b.
    
 
 0.926
SCIN
Scinderin.
    
 
 0.919
ADD2
Beta-adducin isoform a.
    
 
 0.910
LRRFIP1
LRR binding FLII interacting protein 1.
   
 
 0.850
GSN
Gelsolin isoform a.
    
 
 0.850
FLII
FLII actin remodeling protein.
    
 0.822
ADD3
Adducin 3.
    
 
 0.796
EPB42
Erythrocyte membrane protein band 4.2.
   
  
 0.767
ENSCJAP00000060083
Uncharacterized protein.
    
 
 0.764
CORO2A
Coronin; Belongs to the WD repeat coronin family.
   
 
 0.759
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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