STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAMPAngio-associated migratory cell protein. (434 aa)    
Predicted Functional Partners:
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.917
RPL10
Ribosomal protein L10 (Predicted).
    
 
 0.814
ENSCJAP00000061337
Ribosomal_L16 domain-containing protein.
    
 
 0.814
ENSCJAP00000067580
Ribosomal_L16 domain-containing protein.
    
 
 0.814
RPL10L
Ribosomal protein L10 like.
    
 
 0.814
TBXA2R
Thromboxane A2 receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.793
NMD3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.750
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.731
NOD2
Nucleotide binding oligomerization domain containing 2.
     
 0.728
UTP18
U3 small nucleolar RNA-associated protein 18 homolog.
   
  
 0.691
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.