GNB1 protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

GNB1

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1. (340 aa)

Predicted Functional Partners:

GNGT1

0.995

GNG13

0.990

GNG7

0.989

GNAT2

0.986

GNAO1

0.984

GNAT1

0.980

PDE6B

0.972

RHO

0.972

PDE6A

0.969

GNAL

0.968

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNAL	GNAO1	ENSCJAP00000008674	ENSCJAP00000053953	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	0.746
GNAL	GNAT1	ENSCJAP00000008674	ENSCJAP00000008919	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	G protein subunit alpha transducin 1.	0.759
GNAL	GNAT2	ENSCJAP00000008674	ENSCJAP00000005599	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	G protein subunit alpha transducin 2.	0.842
GNAL	GNB1	ENSCJAP00000008674	ENSCJAP00000019968	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.968
GNAL	GNG13	ENSCJAP00000008674	ENSCJAP00000054692	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	G protein gamma domain-containing protein.	0.981
GNAL	GNG7	ENSCJAP00000008674	ENSCJAP00000025056	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.980
GNAL	GNGT1	ENSCJAP00000008674	ENSCJAP00000066153	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.718
GNAO1	GNAL	ENSCJAP00000053953	ENSCJAP00000008674	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	0.746
GNAO1	GNAT1	ENSCJAP00000053953	ENSCJAP00000008919	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	G protein subunit alpha transducin 1.	0.745
GNAO1	GNAT2	ENSCJAP00000053953	ENSCJAP00000005599	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	G protein subunit alpha transducin 2.	0.861
GNAO1	GNB1	ENSCJAP00000053953	ENSCJAP00000019968	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.984
GNAO1	GNG13	ENSCJAP00000053953	ENSCJAP00000054692	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	G protein gamma domain-containing protein.	0.973
GNAO1	GNG7	ENSCJAP00000053953	ENSCJAP00000025056	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.965
GNAO1	GNGT1	ENSCJAP00000053953	ENSCJAP00000066153	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.969
GNAO1	RHO	ENSCJAP00000053953	ENSCJAP00000031629	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	Rhodopsin.	0.797
GNAT1	GNAL	ENSCJAP00000008919	ENSCJAP00000008674	G protein subunit alpha transducin 1.	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform 1.	0.759
GNAT1	GNAO1	ENSCJAP00000008919	ENSCJAP00000053953	G protein subunit alpha transducin 1.	Guanine nucleotide-binding protein G(O) subunit alpha isoform b.	0.745
GNAT1	GNAT2	ENSCJAP00000008919	ENSCJAP00000005599	G protein subunit alpha transducin 1.	G protein subunit alpha transducin 2.	0.993
GNAT1	GNB1	ENSCJAP00000008919	ENSCJAP00000019968	G protein subunit alpha transducin 1.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.980
GNAT1	GNG13	ENSCJAP00000008919	ENSCJAP00000054692	G protein subunit alpha transducin 1.	G protein gamma domain-containing protein.	0.892