STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMPCAPeptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family. (525 aa)    
Predicted Functional Partners:
CYC1
Cytochrome c1, heme protein, mitochondrial.
   
 0.976
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
  
0.975
UQCRB
Ubiquinol-cytochrome c reductase binding protein.
   
 0.969
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
  
0.964
F7HV18_CALJA
Uncharacterized protein; Belongs to the peptidase M16 family.
  
0.953
NDUFV1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.951
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1; Belongs to the complex I 75 kDa subunit family.
   
 0.938
UQCRQ
Ubiquinol-cytochrome c reductase complex III subunit VII.
   
 0.924
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
   
 0.924
NDUFS4
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial.
   
 0.918
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.