STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISL2ISL LIM homeobox 2. (359 aa)    
Predicted Functional Partners:
LHX4
LIM homeobox 4.
   
0.859
LHX3
Uncharacterized protein.
   
0.853
LDB1
LIM domain binding 1.
    
 0.793
LDB2
LIM domain-binding protein 2 isoform a.
    
 0.782
SSBP3
Single-stranded DNA-binding protein 3 isoform a.
    
 
 0.712
SSBP2
Single-stranded DNA-binding protein 2 isoform 1.
    
 
 0.699
SSBP4
Single stranded DNA binding protein 4.
    
 
 0.673
NEUROG2
Neurogenin 2.
   
 
 0.548
PPP1R17
Protein phosphatase 1 regulatory subunit 17.
      
 0.541
ZIC2
Zic family member 2.
   
 
 0.532
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.