STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A1Solute carrier family 17 member 1. (467 aa)    
Predicted Functional Partners:
SLC22A11
Uncharacterized protein.
   
 
 0.769
ENSCJAP00000057377
Regulating synaptic membrane exocytosis 2.
   
 
 0.753
SLC2A9
Solute carrier family 2 member 9; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.716
SLC7A9
B(0,+)-type amino acid transporter 1.
   
  
 0.633
SLC3A1
Solute carrier family 3 member 1.
   
  
 0.604
SLC6A13
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.595
SLC34A1
Solute carrier family 34 member 1.
   
  
 0.589
SLC22A12
Solute carrier family 22 member 12.
   
 
 0.580
SLC22A2
Solute carrier family 22 member 2.
   
 
 0.568
OCRL
OCRL inositol polyphosphate-5-phosphatase.
      
 0.559
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.