STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD2LProgrammed cell death protein 2-like. (366 aa)    
Predicted Functional Partners:
PRMT3
Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.798
GGN
Gametogenetin.
      
 0.644
PABPN1
BCL2L2-PABPN1 protein.
      
 0.579
BYSL
Bystin like.
   
  
 0.574
ZNF277
Uncharacterized protein.
   
 
 0.517
ENSCJAP00000057921
Uncharacterized protein.
   
 
 0.517
LTV1
LTV1 ribosome biogenesis factor.
   
  
 0.479
WTIP
Wilms tumor protein 1-interacting protein.
      
 0.465
HSD17B2
Hydroxysteroid 17-beta dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.444
WDPCP
WD repeat containing planar cell polarity effector.
    
 
 0.440
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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