STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HS6ST1Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (411 aa)    
Predicted Functional Partners:
HS3ST1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.807
GLCE
D-glucuronyl C5-epimerase.
    
 
 0.764
NDST3
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3.
      
 0.689
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.683
GPC3
Glypican 3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.670
ANOS1
Anosmin 1.
      
 0.670
NDST2
Uncharacterized protein.
      
 0.656
EXTL3
Exostosin-like 3; Belongs to the glycosyltransferase 47 family.
      
 0.652
GPC4
Glypican-4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.632
GPC1
Glypican-1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.628
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.