STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIOTrio Rho guanine nucleotide exchange factor. (3100 aa)    
Predicted Functional Partners:
RAC3
Ras-related C3 botulinum toxin substrate 3.
   
 0.748
RAC1
Ras-related C3 botulinum toxin substrate 1 isoform Rac1b.
   
 0.748
RAC2
Rac family small GTPase 2.
   
 0.748
RHOG
Rho-related GTP-binding protein RhoG.
   
 0.719
RHOBTB1
Rho related BTB domain containing 1.
   
 0.704
RHOBTB2
Rho related BTB domain containing 2.
   
 0.704
CDC42
Cell division control protein 42 homolog isoform 1.
   
 0.697
ENSCJAP00000069652
Uncharacterized protein.
   
 0.697
ENSCJAP00000073331
Uncharacterized protein.
   
 0.697
RND3
Rho-related GTP-binding protein RhoE.
   
 0.691
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.