STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB29Solute carrier family 41 member 1. (513 aa)    
Predicted Functional Partners:
NUCKS1
Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1.
 
 
  
 0.654
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
      
 0.639
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
      
 0.606
SLCO3A1
Solute carrier organic anion transporter family member.
   
  
 0.572
RFC3
Replication factor C subunit 3 isoform 1.
      
 0.567
PM20D1
Peptidase M20 domain containing 1.
      
 0.566
DYNC1I1
Cytoplasmic dynein 1 intermediate chain 1 isoform a.
      
 0.564
ADSS2
Adenylosuccinate synthetase isozyme 2; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
      
 0.563
TTLL7
Tubulin tyrosine ligase like 7.
      
 0.561
CLDN16
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.528
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.