STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOFApolipoprotein F. (326 aa)    
Predicted Functional Partners:
CETP
Cholesteryl ester transfer protein.
     
 0.896
APOB
Apolipoprotein B.
   
 
 0.798
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
      
 0.781
ENSCJAP00000072985
Uncharacterized protein.
   
 
 0.720
APOM
Apolipoprotein M isoform 1.
   
  
 0.700
APOA2
Apolipoprotein A-II preproprotein.
   
 
 0.668
FGL1
Fibrinogen like 1.
   
    0.659
PLTP
Phospholipid transfer protein.
     
 0.655
SAA4
Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex.
   
  
 0.641
OS9
Protein OS-9 isoform 1.
      
 0.614
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.