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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPCAT1Lysophosphatidylcholine acyltransferase 1. (529 aa)    
Predicted Functional Partners:
STARD10
StAR related lipid transfer domain containing 10.
     
 0.713
ABCA3
ATP-binding cassette sub-family A member 3.
   
 
 0.644
SCNN1G
Sodium channel epithelial 1 gamma subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
     
 0.593
NCLN
Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning.
    
 
 0.577
MBOAT2
Membrane bound O-acyltransferase domain containing 2; Belongs to the membrane-bound acyltransferase family.
   
 0.573
SFTPB
Surfactant protein B.
     
 0.533
STT3B
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B.
    
 
 0.520
TMEM43
Transmembrane protein 43.
      
 0.516
AUP1
AUP1 lipid droplet regulating VLDL assembly factor.
    
 0.507
CLPS
Colipase.
      
 0.504
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.