STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCM1Glial cells missing transcription factor 1. (437 aa)    
Predicted Functional Partners:
GCM2
Glial cells missing transcription factor 2.
  
  
0.913
ELF5
Uncharacterized protein.
      
 0.604
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.586
ZNF219
Zinc finger protein 219.
   
 
 0.586
GLIS2
GLIS family zinc finger 2.
    
 
 0.569
KLF6
Krueppel-like factor 6 isoform A.
    
 
 0.555
ERVFRD-1
Transmembrane protein; This endogenous retroviral envelope protein has retained its original fusogenic properties and participates in trophoblast fusion and the formation of a syncytium during placenta morphogenesis. The interaction with MFSD2A is apparently important for this process (By similarity); Belongs to the gamma type-C retroviral envelope protein family. HERV class-I FRD env subfamily.
      
 0.553
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.551
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
    
 
 0.543
DLX3
Distal-less homeobox 3.
   
 
 0.536
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.