Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LCN12Lipocalin 12; Belongs to the calycin superfamily. Lipocalin family. (191 aa)    
Predicted Functional Partners:
LCN9
Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.649
RAD17
Cell cycle checkpoint protein RAD17 isoform 2.
   
  
 0.602
STPG3
Sperm-tail PG-rich repeat containing 3.
      
 0.554
CCDC183
Uncharacterized protein.
      
 0.553
LCN8
Lipocalin 8; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.552
PAF1
RNA polymerase II-associated factor 1 homolog isoform 1.
   
 0.470
SLC30A1
Zinc transporter 1.
      
 0.467
LCN6
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.460
ENSCJAP00000069017
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.442
ENSCJAP00000076162
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.442
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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