STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKFN1Ankyrin repeat and fibronectin type III domain containing 1. (1149 aa)    
Predicted Functional Partners:
WRN
WRN RecQ like helicase.
      
 0.597
CEP72
Centrosomal protein 72.
   
    0.596
F7FJF8_CALJA
Uncharacterized protein.
   
    0.596
CCDC175
Coiled-coil domain containing 175.
   
    0.596
TTLL9
Tubulin tyrosine ligase like 9.
   
  
 0.596
FBXL4
F-box/LRR-repeat protein 4.
    
 
 0.480
APTX
Aprataxin.
      
 0.453
C17orf67
Chromosome 17 open reading frame 67.
      
 0.451
SMG8
SMG8 nonsense mediated mRNA decay factor.
      
 0.446
AATF
Apoptosis antagonizing transcription factor.
      
 0.441
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.