STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBLN4Cerebellin 4 precursor. (201 aa)    
Predicted Functional Partners:
PWWP3B
PWWP domain containing 3B.
      
 0.620
F6PY39_CALJA
PDZ and LIM domain 5.
      
 0.605
NECAB1
N-terminal EF-hand calcium binding protein 1.
      
 0.599
COL25A1
Collagen type XXV alpha 1 chain.
    
 
 0.564
TECTA
Tectorin alpha.
      
 0.521
COL23A1
Collagen type XXIII alpha 1 chain.
    
 
 0.508
PTH2R
Parathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.506
SLC16A13
Solute carrier family 16 member 13.
      
 0.504
DOCK4
Dedicator of cytokinesis 4; Belongs to the DOCK family.
      
 0.503
LENG1
Leukocyte receptor cluster member 1 (Predicted).
      
 0.501
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.