STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOT2Aspartate aminotransferase. (430 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase.
   
 0.997
GPT2
Glutamic--pyruvic transaminase 2.
   
 0.995
GOT1
Aspartate aminotransferase.
  
0.980
LOC100415308
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.978
MDH1
Malate dehydrogenase.
   
 0.973
ASNS
Asparagine synthetase [glutamine-hydrolyzing].
   
 
 0.972
GLUD1
Glutamate dehydrogenase 1, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.972
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
  
0.971
TAT
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
 0.971
HPD
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.971
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.