STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S1PR4Sphingosine-1-phosphate receptor 4. (384 aa)    
Predicted Functional Partners:
GNA12
Guanine nucleotide-binding protein subunit alpha-12.
 
  
 0.960
GNAI3
Guanine nucleotide-binding protein G(K) subunit alpha.
 
  
 0.940
GNAI1
Guanine nucleotide-binding protein G(I) subunit alpha-1 isoform 1.
 
  
 0.940
GNAI2
Guanine nucleotide-binding protein G(I) subunit alpha-2 isoform 1.
 
  
 0.940
GNA13
G protein subunit alpha 13.
 
  
 0.933
S1PR1
Sphingosine-1-phosphate receptor 1; Belongs to the G-protein coupled receptor 1 family.
     
0.915
OR2W1
Olfactory receptor.
      
 0.779
SPHK2
Sphingosine kinase 2.
      
 0.640
OR3A1
Olfactory receptor.
      
 0.620
OR2T11
Olfactory receptor.
      
 0.618
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.