STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STXBP4Syntaxin binding protein 4. (554 aa)    
Predicted Functional Partners:
STX4
Syntaxin 4; Belongs to the syntaxin family.
   
 0.658
IFT57
Intraflagellar transport 57.
    
 0.585
DHX57
DExH-box helicase 57.
   
 0.564
TOM1L1
Target of myb1 like 1 membrane trafficking protein; Belongs to the TOM1 family.
 
    
 0.557
EXOC2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 
 0.554
IFT80
WD_REPEATS_REGION domain-containing protein.
   
 0.541
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.537
ENSCJAP00000054910
Uncharacterized protein.
    
 0.537
MYO3B
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.535
IFT88
Intraflagellar transport 88.
   
 0.527
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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