STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCLNNicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. (563 aa)    
Predicted Functional Partners:
TMEM147
Transmembrane protein 147 isoform 1.
    
 
 0.911
CCDC47
Coiled-coil domain-containing protein 47.
    
 
 0.904
TMCO1
Transmembrane and coiled-coil domains 1.
   
 
 0.873
TBATA
Thymus, brain and testes associated.
      
 0.871
DENND3
DENN domain containing 3.
      
 0.823
ENSCJAP00000078540
Uncharacterized protein.
    
 
 0.812
SEC61A1
Protein transport protein Sec61 subunit alpha isoform 1.
   
 
 0.772
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.772
RPL18
Ribosomal protein L18.
    
   0.740
RPL35
Ribosomal protein L35.
    
   0.740
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.