STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF4TNF receptor superfamily member 4. (271 aa)    
Predicted Functional Partners:
TNFSF4
Tumor necrosis factor ligand 2B; Belongs to the tumor necrosis factor family.
    
 0.987
TNFRSF9
TNF receptor superfamily member 9.
   
 
 0.797
TNFRSF18
GITR.
   
  
 0.726
CD70
CD70 molecule; Belongs to the tumor necrosis factor family.
   
  
 0.669
ICOSLG
Uncharacterized protein.
   
  
 0.650
CD86
Ig-like domain-containing protein.
      
 0.645
TNFSF9
TNF superfamily member 9; Belongs to the tumor necrosis factor family.
      
 0.645
CD80
Uncharacterized protein.
      
 0.645
TNFSF8
Tumor necrosis factor ligand 3A; Belongs to the tumor necrosis factor family.
      
 0.625
ICOS
Inducible T cell costimulator.
   
  
 0.624
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.