STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX4Caudal type homeobox 4. (284 aa)    
Predicted Functional Partners:
FGF4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.647
OGG1
8-oxoguanine DNA glycosylase.
      
 0.641
TBPL2
TATA-box binding protein like 2.
   
 
 0.593
TBXT
T-box transcription factor T.
   
 
 0.559
TIMP3
Uncharacterized protein.
      
 0.547
B3GALTL
Beta-1,3-glucosyltransferase.
      
 0.516
PEX11G
Peroxisomal biogenesis factor 11 gamma.
      
 0.516
MEDAG
Mesenteric estrogen dependent adipogenesis.
      
 0.515
SLC16A2
Solute carrier family 16 member 2.
      
 0.515
MIXL1
Mix paired-like homeobox.
  
 
 
 0.501
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.