STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX4Caudal type homeobox 4. (284 aa)    
Predicted Functional Partners:
CHIC1
Cysteine-rich hydrophobic domain 1 protein.
      
 0.692
TBPL2
TATA-box binding protein like 2.
   
 
 0.664
CDX1
Caudal type homeobox 1.
   
 
 0.663
OGG1
8-oxoguanine DNA glycosylase.
      
 0.605
FGF4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.602
WNT11
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
 
 0.599
FGF5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.587
TBX6
Uncharacterized protein.
   
 
 0.564
TACSTD2
Tumor associated calcium signal transducer 2.
      
 0.563
KDSR
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.552
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.