STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD52Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C. (1076 aa)    
Predicted Functional Partners:
PPP6R1
Serine/threonine-protein phosphatase 6 regulatory subunit 1.
    
 0.880
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.866
PPP6C
Serine/threonine-protein phosphatase.
    
 0.851
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.847
PAIP2
PAM2 domain-containing protein.
      
 0.625
EIF3J
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...]
    
 
 0.593
CDR1
Cerebellar degeneration related protein 1.
    
 0.492
TULP4
Tubby-related protein 4 isoform 1.
   
 
 0.490
ZNF609
Zinc finger protein 609.
      
 0.461
PABPN1
BCL2L2-PABPN1 protein.
   
 
 0.458
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.