Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM41BTransmembrane protein 41B isoform 1. (291 aa)    
Predicted Functional Partners:
VMP1
Vacuole membrane protein 1.
    
 
 0.799
TMEM106B
Transmembrane protein 106B.
      
 0.738
MBTPS1
Membrane-bound transcription factor site-1 protease preproprotein.
      
 0.729
KXD1
KxDL motif containing 1.
      
 0.715
WDR46
WD repeat domain 46.
 
      0.712
GOLT1B
Vesicle transport protein GOT1B.
   
 
 0.706
MINAR1
Membrane integral NOTCH2 associated receptor 1.
      
 0.679
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
      
 0.678
AP1G1
AP-1 complex subunit gamma.
   
  
 0.650
CASC4
Cancer susceptibility 4.
      
 0.630
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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