STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP40Rho GTPase activating protein 40. (623 aa)    
Predicted Functional Partners:
HS3ST6
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
   0.889
HS3ST3B1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
   0.880
HS3ST3A1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
   0.879
MYO3A
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.831
SLC32A1
Solute carrier family 32 member 1.
      
 0.628
GAD2
Glutamate decarboxylase 2.
      
 0.492
KIAA1755
KIAA1755.
      
 0.491
RHOBTB3
Rho-related BTB domain-containing protein 3.
   
 0.477
RHOA
Transforming protein RhoA.
   
 0.459
RHOC
Uncharacterized protein.
   
 0.459
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.