STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP40Rho GTPase activating protein 40. (623 aa)    
Predicted Functional Partners:
TNS3
Tensin 3.
    
 
 0.508
TNS1
Tensin 1.
    
 
 0.508
TNS2
Tensin 2.
    
 
 0.508
CD2AP
CD2 associated protein.
   
 
 0.448
SH3KBP1
SH3 domain-containing kinase-binding protein 1 isoform a.
   
 
 0.435
ENSCJAP00000075950
Uncharacterized protein.
   
 
 0.435
RHOBTB3
Rho-related BTB domain-containing protein 3.
   
 0.418
ENSCJAP00000077543
V-set and transmembrane domain containing 2 like.
      
 0.402
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.