STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF41E3 ubiquitin-protein ligase NRDP1 isoform 1. (317 aa)    
Predicted Functional Partners:
USP8
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
    
 0.992
ERBB3
Receptor tyrosine-protein kinase erbB-3 isoform 1.
    
 0.904
EGFR
Receptor protein-tyrosine kinase.
    
 0.896
BIRC6
Baculoviral IAP repeat-containing protein 6.
    
 0.849
ASB6
Ankyrin repeat and SOCS box protein 6 isoform 1.
   
 0.818
USP21
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 0.805
ENSCJAP00000069313
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 0.805
ERBB4
Receptor protein-tyrosine kinase.
    
 0.795
VPS52
Vacuolar protein sorting-associated protein 52 homolog.
    
 
 0.775
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.720
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.