STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA12ATP binding cassette subfamily A member 12. (2595 aa)    
Predicted Functional Partners:
GRB14
Growth factor receptor bound protein 14.
   
  
 0.732
CYP4F22
Cytochrome P450 family 4 subfamily F member 22; Belongs to the cytochrome P450 family.
   
 
 0.651
TGM1
Protein-glutamine gamma-glutamyltransferase K.
   
  
 0.601
NIPAL4
NIPA like domain containing 4.
   
  
 0.579
SARM1
Sterile alpha and TIR motif-containing protein 1.
      
 0.574
ZBTB20
Zinc finger and BTB domain containing 20.
    
 
 0.487
MSLNL
Mesothelin like.
      
 0.472
LIPN
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
  
 0.469
RAI14
Retinoic acid induced 14.
    
 
 0.464
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.463
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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